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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881338.1_cds_XP_016437747.1_33477
CDS Infomation

[gene=LOC107763764] [db_xref=GeneID:107763764] [protein=probable protein phosphatase 2C 38] [protein_id=XP_016437747.1] [location=join(22441..22741,24163..24530,24692..24925,25328..25570)] [gbkey=CDS]
Sequence

ATGATTAAGCCTTGTTGGAAGCCTTATGTTGAGGGGGATGGTGTAGGAAGGGGTGGTGAT
TCTAGGGGTAGGGTTGATGGTTTAATGTGGTATAAGGATTTGGGGGTTCATGCAAATGGA
GAATTTTCAATGGGAATTATACAAGCCAATAATTTGATGGAGGATCAAAGTCAACTTGAA
TCAGGGCCATTGAGTTGTCTTGAATCAGGTCCAAATGGAACATTTGTTGGAGTCTATGAT
GGACATGGAGGACCGGAAACGTCGCGTTTCGTAAACAACACTTTGTTCTCCAATCTTAAG
AAATTTGCGACAGAACATCAGGAAATGTCTGCAGATGTCATAAGAAAAGCTTTCTTGACA
ACGGAAGAGGAGTTTTTGTCACTTGTCAAGCAACAATGGTTTGAGAAGCCACAAATTGCA
TCAGTGGGATCATGCTGTTTGGTGGGCGTAATCTGCAGTGGACTACTATATGTTGCCAAT
GCCGGAGATTCGCGAGTGGTATTAGGTAGAGCAGAAAAAGGTGCAAGGGGTGTGACAGCT
ATTCAATTGTCCATGGAGCACAACGCTAATAATGAGTCTGTGAGAGACGAGCTTAGATCA
TTGCATCCCCAGGATTCGCAGATTGTGCTTCTCAAACACAAAGTTTGGCGTGTCAAGGGT
ATCATACAGGTTTCAAGGTCCATTGGTGATGCCTATCTTAAGAAGGCAGAGTTCAATCAG
TCACCATTATTAGCAAAGTTTAGATTGCCCTCCTTCTCTACGCCAATTCTCAGTGCGGAG
CCATCAATATTCATTCACAGGTTGACTTCCAAGGATCAGTTCCTCATATTTGCTTCAGAT
GGTCTCTGGGAACATCTGAGTAACCAGGAGGCTGTTGATATAGTCCACAGTCAACCCCGA
AATGGGATTGCAAGGAGACTAATCAAAGCTGCTCTTCGAGTGGCAGCTAAGAAAAGAGAA
ATGAGATACTCAGACCTGAAGAAGATTGAACGAGGTGTAAGGAGGCATTTCCATGATGAT
ATCACGGTCGTGGTTGTGTTTATGGATCCATATTCCATGAATAGAAGCTCTTCTCAAAGT
CCAATACTCTCCATTAGAGGAGGAGGAGGAGGAGGAGGAGGTATGCCCGCCTCTCCCAAA
CGATAG

Peptide Sequence

PEP ID

XP_016437747.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 [Nicotiana tabacum]
Sequence

MIKPCWKPYVEGDGVGRGGDSRGRVDGLMWYKDLGVHANGEFSMGIIQANNLMEDQSQLE
SGPLSCLESGPNGTFVGVYDGHGGPETSRFVNNTLFSNLKKFATEHQEMSADVIRKAFLT
TEEEFLSLVKQQWFEKPQIASVGSCCLVGVICSGLLYVANAGDSRVVLGRAEKGARGVTA
IQLSMEHNANNESVRDELRSLHPQDSQIVLLKHKVWRVKGIIQVSRSIGDAYLKKAEFNQ
SPLLAKFRLPSFSTPILSAEPSIFIHRLTSKDQFLIFASDGLWEHLSNQEAVDIVHSQPR
NGIARRLIKAALRVAAKKREMRYSDLKKIERGVRRHFHDDITVVVVFMDPYSMNRSSSQS
PILSIRGGGGGGGGMPASPKR

Transcript Sequence

Gene sequence data has not been registered.